DisCentricDB A disease-centric interaction database among diseases and various associated genes

Download

Latest

File Description
interactions.csv A tab-delimited file containing all the latest interactions and associations including lncRNA-disease, lncRNA-microRNA, microRNA-disease, microRNA-gene, gene-disease and gene-lncRNA in the current database. download
items.csv A tab-delimited file containing the latest detailed information of lncRNAs, microRNAs, protein-coding genes and diseases such as ID, name and symbol in the current database. download

Archieved

File Description
interactions_2020.7.30.csv A tab-delimited file containing all the latest interactions and associations including lncRNA-disease, lncRNA-microRNA, microRNA-disease, microRNA-gene, gene-disease and gene-lncRNA as of July 30, 2020. download
items_2020.7.30.csv A tab-delimited file containing the latest detailed information of lncRNAs, microRNAs, protein-coding genes and diseases such as ID, name and symbol as of July 30, 2020. download
API

URL Form

https://discentricdb.cn/api/links

  • The all associations between diseases and various genes, and all interactions among these genes in DisCentricDB.

https://discentricdb.cn/api/nodes

  • The all information of diseases and various genes in DisCentricDB.

https://discentricdb.cn/api/search_result?datatype=**&keyword=**&dataset=**&category=**

  • datatype = What type of data would you like to download: node information or edge information
  • keyword = The gene symbol/ID or Diseases name/ID that you want to search
  • dataset = The keyword category that you want to search
  • category = The gene/disease category that you want to search

Specification of Tag Values

  • For "datatype" tag:

Valid Values Note
link Link Information
node Node Information

  • For "dataset" tag:

Valid Values Note
rnaSymbol RNA Symbol
rnaID HGNC ID of lncRNA&protein-coding gene / miRBase ID of microRNA
diseaseName Disease Name
diseaseID MONDO ID

  • For "category" tag:

Valid Values Note
disease category limit to 'disease'
lncRNA category limit to 'lncRNA'
pcgene category limit to 'protein-coding gene'
miRNA category limit to 'microRNA'

Example

  • Searching for link information with 'aids' as keyword:

    • https://discentricdb.cn/api/search_result?datatype=link&keyword=aids&dataset=diseaseName&category=disease

  • Searching for node information with 'aids' as keyword:

    • https://discentricdb.cn/api/search_result?datatype=node&keyword=aids&dataset=diseaseName&category=disease